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SNCA synuclein alpha [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102119369, updated on 1-Aug-2024

Summary

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Gene symbol
SNCA
Gene description
synuclein alpha
See related
Ensembl:ENSMFAG00000041402
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SNCA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 5 NC_088379.1 (95269481..95381117, complement)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 5 NC_052259.1 (86722390..86833307, complement)

Chromosome 5 - NC_088379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135970802 Neighboring gene uncharacterized LOC135970958 Neighboring gene multimerin 1 Neighboring gene NADH-ubiquinone oxidoreductase chain 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Age-dependent alpha-synuclein accumulation is correlated with elevation of mitochondrial TRPC3 in the brains of monkeys and mice. Chen M, et al. J Neural Transm (Vienna), 2017 Apr. PMID 27904950
  2. alpha-Synuclein A53T substitution associated with Parkinson disease also marks the divergence of Old World and New World primates. Hamilton BA. Genomics, 2004 Apr. PMID 15028296
  3. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cuprous ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-synuclein
Names
Non-A beta component of AD amyloid
synuclein, alpha (non A4 component of amyloid precursor)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088379.1 Reference T2T-MFA8v1.0

    Range
    95269481..95381117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005555422.4 → XP_005555479.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  2. XM_015450650.3 → XP_015306136.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  3. XM_045392646.2 → XP_045248581.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  4. XM_015450652.3 → XP_015306138.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  5. XM_045392647.2 → XP_045248582.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  6. XM_005555421.4 → XP_005555478.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  7. XM_005555419.4 → XP_005555476.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  8. XM_045392648.2 → XP_045248583.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  9. XM_005555420.4 → XP_005555477.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  10. XM_005555418.4 → XP_005555475.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  11. XM_015450649.3 → XP_015306135.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  12. XM_045392650.2 → XP_045248585.2  alpha-synuclein isoform X3

  13. XM_065545239.1 → XP_065401311.1  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  14. XM_015450651.3 → XP_015306137.2  alpha-synuclein isoform X1

    UniProtKB/TrEMBL
    A0A7N9CY49

  15. XM_045392649.2 → XP_045248584.2  alpha-synuclein isoform X2

    UniProtKB/TrEMBL
    A0A2K5WVX4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P61142.1 GenPept UniProtKB/Swiss-Prot:P61142

Gene LinkOut

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