U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LURAP1L-AS1 LURAP1L antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929467, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
LURAP1L-AS1provided by HGNC
Official Full Name
LURAP1L antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:49761
See related
Ensembl:ENSG00000235448 AllianceGenome:HGNC:49761
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LURAP1L-AS1 in Genome Data Viewer
Location:
9p23
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (12699999..12814389, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (12709327..12823714, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (12699999..12814388, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:12334327-12334960 Neighboring gene JNK1/MAPK8-associated membrane protein pseudogene 1 Neighboring gene RNA, U2 small nuclear 47, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:12438630-12439130 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:12439131-12439631 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:12440846-12441628 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:12463247-12463746 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 9:12581404 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 9:12636264 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 9:12651340 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 9:12660541 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 9:12671566 Neighboring gene melanoma risk locus-associated MPRA allelic enhancers 9:12675264 and 9:12675284 Neighboring gene tyrosinase related protein 1 Neighboring gene RNA, 7SL, cytoplasmic 849, pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:12814001-12815200 Neighboring gene leucine rich adaptor protein 1 like Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:12948228-12949066 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr9:12953525-12954183 Neighboring gene small nucleolar RNA, C/D box 137 Neighboring gene lupus La protein-like Neighboring gene peroxiredoxin 1 pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:13037568-13038084

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125775.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AI521216, BQ416907, DA711357
    Related
    ENST00000417638.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    12699999..12814389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    12709327..12823714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials