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LOC101927521 uncharacterized LOC101927521 [ Homo sapiens (human) ]

Gene ID: 101927521, updated on 22-Oct-2024

Summary

Gene symbol
LOC101927521
Gene description
uncharacterized LOC101927521
See related
Ensembl:ENSG00000265751
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC101927521 in Genome Data Viewer
Location:
18q11.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (21380044..21451047, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (21565103..21636111, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (18960005..19031008, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene EXOG pseudogene 1 Neighboring gene GREB1L divergent transcript Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:18842887-18843414 Neighboring gene GREB1 like retinoic acid receptor coactivator Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:18922270-18922868 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr18:18966717-18967517 Neighboring gene NANOG hESC enhancer GRCh37_chr18:18970956-18971808 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:18981989-18982490 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:18982491-18982990 Neighboring gene small nucleolar RNA SNORD23 Neighboring gene establishment of sister chromatid cohesion N-acetyltransferase 1 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr18:19171613-19172342 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:19173073-19173800 Neighboring gene Sharpr-MPRA regulatory region 3945 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13133 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13134 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13135 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9341 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13136 Neighboring gene small nuclear ribonucleoprotein D1 polypeptide

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187982.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC011774, AC015878
    Related
    ENST00000584611.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    21380044..21451047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    21565103..21636111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)