U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02395 long intergenic non-protein coding RNA 2395 [ Homo sapiens (human) ]

Gene ID: 101927292, updated on 17-Sep-2024

Summary

Official Symbol
LINC02395provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2395provided by HGNC
Primary source
HGNC:HGNC:53322
See related
Ensembl:ENSG00000257771 AllianceGenome:HGNC:53322
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC02395 in Genome Data Viewer
Location:
12q13.12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (49911953..49926339)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (49874963..49889345)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (50305736..50320122)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene Fas apoptotic inhibitory molecule 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50280844-50281632 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr12:50281633-50282421 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50282422-50283210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50288891-50289470 Neighboring gene long intergenic non-protein coding RNA 2396 Neighboring gene uncharacterized LOC124902930 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:50335615-50336600 Neighboring gene uncharacterized LOC105369763 Neighboring gene NANOG-H3K4me1 hESC enhancers GRCh37_chr12:50338782-50339658 and GRCh37_chr12:50339659-50340534 Neighboring gene AQP5 and AQP2 antisense RNA 2 Neighboring gene aquaporin 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of obsessive-compulsive disorder.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110048.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131157
    Related
    ENST00000546821.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    49911953..49926339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    49874963..49889345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)