U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02611 long intergenic non-protein coding RNA 2611 [ Homo sapiens (human) ]

Gene ID: 101927070, updated on 17-Sep-2024

Summary

Official Symbol
LINC02611provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2611provided by HGNC
Primary source
HGNC:HGNC:54060
See related
Ensembl:ENSG00000226791 AllianceGenome:HGNC:54060
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC02611 in Genome Data Viewer
Location:
2q11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (98761063..98771898, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (99219506..99230332, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (99377526..99388361, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A Neighboring gene uncharacterized LOC124906050 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11803 Neighboring gene uncharacterized LOC107985922 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11804 Neighboring gene Sharpr-MPRA regulatory region 13812 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:99364030-99364530 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:99364531-99365031 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:99386702-99387202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:99387203-99387703 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:99389840-99390340 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:99390341-99390841 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:99391147-99392024 Neighboring gene NANOG hESC enhancer GRCh37_chr2:99395023-99395587 Neighboring gene RNA, U4 small nuclear 84, pseudogene Neighboring gene CRACD like Neighboring gene Sharpr-MPRA regulatory region 14605 Neighboring gene RNA, U7 small nuclear 46 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126337.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC109826, BX370315, BX383502, DB118793
    Related
    ENST00000419865.6

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    98761063..98771898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    99219506..99230332 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)