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Sycp3 synaptonemal complex protein 3 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 101787294, updated on 8-Mar-2024

Summary

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Gene symbol
Sycp3
Gene description
synaptonemal complex protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Sycp3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947491.1 (90134987..90152068, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176410.1 (1128432..1137447)

NW_026947491.1Genomic Context describing neighboring genes Neighboring gene myosin binding protein C1 Neighboring gene choline phosphotransferase 1 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene DNA damage regulated autophagy modulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptonemal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptonemal complex protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947491.1 Reference mCavPor4.1

    Range
    90134987..90152068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063255452.1 → XP_063111522.1  synaptonemal complex protein 3 isoform X4

  2. XM_063255453.1 → XP_063111523.1  synaptonemal complex protein 3 isoform X4

  3. XM_063255450.1 → XP_063111520.1  synaptonemal complex protein 3 isoform X2

  4. XM_063255449.1 → XP_063111519.1  synaptonemal complex protein 3 isoform X1

  5. XM_063255454.1 → XP_063111524.1  synaptonemal complex protein 3 isoform X4

  6. XM_063255451.1 → XP_063111521.1  synaptonemal complex protein 3 isoform X3

Nucleotide Protein
Heading Accession and Version

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