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LOC101786000 uncharacterized protein At4g06598 [ Setaria italica (foxtail millet) ]

Gene ID: 101786000, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101786000
Gene description
uncharacterized protein At4g06598
Locus tag
SETIT_010440mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC101786000 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) VII NC_028456.1 (32665898..32669832, complement)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675967.1 (32666131..32670013, complement)

Chromosome VII - NC_028456.1Genomic Context describing neighboring genes Neighboring gene tRNA pseudouridine synthase A Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC2 Neighboring gene protein FLX-like 3 Neighboring gene probable thiamine biosynthetic bifunctional enzyme, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein At4g06598

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028456.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    32665898..32669832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004977100.3 → XP_004977157.1  uncharacterized protein At4g06598

    UniProtKB/TrEMBL
    K3Y899
    Conserved Domains (1) summary
    cd14703
    Location:216 → 266
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein Strain
Heading Accession and Version

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