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LOC101784276 uncharacterized LOC101784276 [ Setaria italica (foxtail millet) ]

Gene ID: 101784276, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101784276
Gene description
uncharacterized LOC101784276
Locus tag
SETIT_022099mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC101784276 in Genome Data Viewer
Location:
chromosome: III
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) III NC_028452.1 (1789195..1792211, complement)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675963.1 (1789233..1792309, complement)

Chromosome III - NC_028452.1Genomic Context describing neighboring genes Neighboring gene cell division protein FtsZ homolog 1, chloroplastic Neighboring gene uncharacterized LOC101783867 Neighboring gene zinc finger CCCH domain-containing protein 31 Neighboring gene probable plastid-lipid-associated protein 13, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC101784276

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028452.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    1789195..1792211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004960145.4 → XP_004960202.1  uncharacterized protein LOC101784276

    See identical proteins and their annotated locations for XP_004960202.1

    UniProtKB/TrEMBL
    K3Z6D0
    Conserved Domains (3) summary
    TIGR01557
    Location:241 → 297
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:181 → 307
    PLN03162; golden-2 like transcription factor; Provisional
    pfam14379
    Location:328 → 371
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif

  2. XM_004960147.4 → XP_004960204.1  uncharacterized protein LOC101784276

    See identical proteins and their annotated locations for XP_004960204.1

    UniProtKB/TrEMBL
    K3Z6D0
    Conserved Domains (3) summary
    TIGR01557
    Location:241 → 297
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:181 → 307
    PLN03162; golden-2 like transcription factor; Provisional
    pfam14379
    Location:328 → 371
    Myb_CC_LHEQLE; MYB-CC type transfactor, LHEQLE motif
Nucleotide Protein Strain
Heading Accession and Version

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