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LOC101767077 NAC domain-containing protein 48 [ Setaria italica (foxtail millet) ]

Gene ID: 101767077, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101767077
Gene description
NAC domain-containing protein 48
Locus tag
SETIT_0024131mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC101767077 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) V NC_028454.1 (43197246..43199771, complement)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675965.1 (43198071..43200594, complement)

Chromosome V - NC_028454.1Genomic Context describing neighboring genes Neighboring gene gibberellin 20 oxidase 2 Neighboring gene probable methyltransferase PMT26 Neighboring gene U-box domain-containing protein 4 Neighboring gene uncharacterized protein At5g08430

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 48

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028454.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    43197246..43199771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004970758.3 → XP_004970815.1  NAC domain-containing protein 48

    UniProtKB/TrEMBL
    A0A368RE84
    Conserved Domains (1) summary
    pfam02365
    Location:11 → 134
    NAM; No apical meristem (NAM) protein
Nucleotide Protein Strain
Heading Accession and Version

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