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LOC101756518 zinc finger CCCH domain-containing protein 12 [ Setaria italica (foxtail millet) ]

Gene ID: 101756518, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101756518
Gene description
zinc finger CCCH domain-containing protein 12
Locus tag
SETIT_001558mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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See LOC101756518 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) V NC_028454.1 (44761659..44767654, complement)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675965.1 (44762497..44768485, complement)

Chromosome V - NC_028454.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101755440 Neighboring gene uncharacterized LOC101755854 Neighboring gene leucine-rich repeat receptor protein kinase MSP1 Neighboring gene CRIB domain-containing protein RIC4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028454.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    44761659..44767654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004971000.4 → XP_004971057.1  zinc finger CCCH domain-containing protein 12

    UniProtKB/TrEMBL
    K3XI36
    Conserved Domains (1) summary
    pfam00642
    Location:358 → 384
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Nucleotide Protein Strain
Heading Accession and Version

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