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Fth1 ferritin heavy chain 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101723628, updated on 8-Mar-2024

Summary

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Gene symbol
Fth1
Gene description
ferritin heavy chain 1
See related
Ensembl:ENSHGLG00000003647
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Fth1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624926.1 (469870..471142)

NW_004624926.1Genomic Context describing neighboring genes Neighboring gene threonine aspartase 1-like Neighboring gene uncharacterized LOC110347400 Neighboring gene bestrophin 1 Neighboring gene RAB3A interacting protein like 1 Neighboring gene fatty acid desaturase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624926 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. FRAMA: from RNA-seq data to annotated mRNA assemblies. Bens M, et al. BMC Genomics, 2016 Jan 14. PMID 26763976, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sequestering of iron ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ferritin heavy chain
NP_001297233.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001310304.1 → NP_001297233.1  ferritin heavy chain

    See identical proteins and their annotated locations for NP_001297233.1

    Status: PROVISIONAL

    Source sequence(s)
    KM486707
    UniProtKB/TrEMBL
    A0A0A7HRF9
    Related
    ENSHGLP00000004977.1, ENSHGLT00000005041.1
    Conserved Domains (2) summary
    cd01056
    Location:14 → 174
    Euk_Ferritin; eukaryotic ferritins
    pfam00210
    Location:18 → 159
    Ferritin; Ferritin-like domain

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624926.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    469870..471142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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