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LOC101717359 alpha-1-antiproteinase S [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101717359, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101717359
Gene description
alpha-1-antiproteinase S
Locus tag
GW7_16189
See related
Ensembl:ENSHGLG00000015652
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
SERPINA1
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Genomic context

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See LOC101717359 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (7115463..7124595, complement)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene GSK3B interacting protein Neighboring gene autophagy related 2B Neighboring gene serpin A11 Neighboring gene serpin family A member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1-antiproteinase S
Names
alpha-1-antitrypsin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    7115463..7124595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004836997.3 → XP_004837054.1  alpha-1-antiproteinase S

    See identical proteins and their annotated locations for XP_004837054.1

    UniProtKB/TrEMBL
    G5B496
    Related
    ENSHGLP00000021935.1, ENSHGLT00000022145.1
    Conserved Domains (1) summary
    cd02056
    Location:50 → 409
    alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...

  2. XM_013066639.2 → XP_012922093.1  alpha-1-antiproteinase S

    See identical proteins and their annotated locations for XP_012922093.1

    UniProtKB/TrEMBL
    G5B496
    Conserved Domains (1) summary
    cd02056
    Location:50 → 409
    alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...
Nucleotide Protein
Heading Accession and Version

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