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Zc3h6 zinc finger CCCH-type containing 6 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101714135, updated on 8-Mar-2024

Summary

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Gene symbol
Zc3h6
Gene description
zinc finger CCCH-type containing 6
Locus tag
GW7_11106
See related
Ensembl:ENSHGLG00000011882
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Zc3h6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (32910..105889, complement)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 8 Neighboring gene uncharacterized LOC110349044

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 6
Names
Zinc finger CCCH domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    32910..105889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021257963.1 → XP_021113622.1  zinc finger CCCH domain-containing protein 6 isoform X3

    UniProtKB/TrEMBL
    G5BFC6
    Conserved Domains (1) summary
    COG5084
    Location:208 → 282
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

  2. XM_021257962.1 → XP_021113621.1  zinc finger CCCH domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    G5BFC6
    Conserved Domains (1) summary
    COG5084
    Location:277 → 351
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

  3. XM_013072100.2 → XP_012927554.2  zinc finger CCCH domain-containing protein 6 isoform X2

    UniProtKB/TrEMBL
    G5BFC6
    Related
    ENSHGLP00000016615.1, ENSHGLT00000016785.1
    Conserved Domains (1) summary
    COG5084
    Location:270 → 344
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]

  4. XM_021257964.1 → XP_021113623.1  zinc finger CCCH domain-containing protein 6 isoform X3

    UniProtKB/TrEMBL
    G5BFC6
    Conserved Domains (1) summary
    COG5084
    Location:208 → 282
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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