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Ttll5 tubulin tyrosine ligase like 5 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101713873, updated on 8-Mar-2024

Summary

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Gene symbol
Ttll5
Gene description
tubulin tyrosine ligase like 5
See related
Ensembl:ENSHGLG00000009260
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Ttll5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (25740347..26021519, complement)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 43 Neighboring gene transforming growth factor beta 3 Neighboring gene serine/threonine-protein phosphatase 2A catalytic subunit beta isoform pseudogene Neighboring gene ergosterol biosynthesis 28 homolog Neighboring gene FLVCR choline and putative heme transporter 2 Neighboring gene uncharacterized LOC110346107

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin polyglutamylase TTLL5
Names
tubulin tyrosine ligase-like family, member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    25740347..26021519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021246206.1 → XP_021101865.1  tubulin polyglutamylase TTLL5 isoform X11

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1147
    Retinal; Retinal protein

  2. XM_021246211.1 → XP_021101870.1  tubulin polyglutamylase TTLL5 isoform X12

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1147
    Retinal; Retinal protein

  3. XM_021246191.1 → XP_021101850.1  tubulin polyglutamylase TTLL5 isoform X9

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1147
    Retinal; Retinal protein

  4. XM_021246165.1 → XP_021101824.1  tubulin polyglutamylase TTLL5 isoform X3

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1322
    Retinal; Retinal protein

  5. XM_021246160.1 → XP_021101819.1  tubulin polyglutamylase TTLL5 isoform X2

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1304
    Retinal; Retinal protein

  6. XM_021246170.1 → XP_021101829.1  tubulin polyglutamylase TTLL5 isoform X5

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:927 → 1287
    Retinal; Retinal protein

  7. XM_021246182.1 → XP_021101841.1  tubulin polyglutamylase TTLL5 isoform X7

    UniProtKB/TrEMBL
    G5B692
    Related
    ENSHGLP00000012949.1, ENSHGLT00000013086.1
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1304
    Retinal; Retinal protein

  8. XM_021246223.1 → XP_021101882.1  tubulin polyglutamylase TTLL5 isoform X12

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1147
    Retinal; Retinal protein

  9. XM_021246199.1 → XP_021101858.1  tubulin polyglutamylase TTLL5 isoform X10

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:19 → 297
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:846 → 1206
    Retinal; Retinal protein

  10. XM_021246175.1 → XP_021101834.1  tubulin polyglutamylase TTLL5 isoform X6

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:923 → 1283
    Retinal; Retinal protein

  11. XM_021246148.1 → XP_021101807.1  tubulin polyglutamylase TTLL5 isoform X1

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1304
    Retinal; Retinal protein

  12. XM_021246152.1 → XP_021101811.1  tubulin polyglutamylase TTLL5 isoform X1

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1304
    Retinal; Retinal protein

  13. XM_021246155.1 → XP_021101814.1  tubulin polyglutamylase TTLL5 isoform X1

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1304
    Retinal; Retinal protein

  14. XM_021246233.1 → XP_021101892.1  tubulin polyglutamylase TTLL5 isoform X14

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    cl17255
    Location:1 → 131
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain
    cl25836
    Location:680 → 1040
    Retinal; Retinal protein

  15. XM_021246186.1 → XP_021101845.1  tubulin polyglutamylase TTLL5 isoform X8

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:906 → 1266
    Retinal; Retinal protein

  16. XM_021246166.1 → XP_021101825.1  tubulin polyglutamylase TTLL5 isoform X4

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:927 → 1287
    Retinal; Retinal protein

  17. XM_021246228.1 → XP_021101887.1  tubulin polyglutamylase TTLL5 isoform X13

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (1) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family

  18. XM_021246216.1 → XP_021101875.1  tubulin polyglutamylase TTLL5 isoform X12

    UniProtKB/TrEMBL
    G5B692
    Conserved Domains (2) summary
    pfam03133
    Location:117 → 395
    TTL; Tubulin-tyrosine ligase family
    cl25836
    Location:944 → 1147
    Retinal; Retinal protein

RNA

  1. XR_002389923.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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