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Rhoj ras homolog family member J [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101713021, updated on 8-Mar-2024

Summary

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Gene symbol
Rhoj
Gene description
ras homolog family member J
Locus tag
GW7_17498
See related
Ensembl:ENSHGLG00000008094
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Rhoj in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (37720834..37831907, complement)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 regulatory subunit B'epsilon Neighboring gene uncharacterized LOC101712429 Neighboring gene protein kinase C iota type pseudogene Neighboring gene glycoprotein hormone subunit beta 5 Neighboring gene potassium voltage-gated channel subfamily H member 5 Neighboring gene uncharacterized LOC110346552

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho-related GTP-binding protein RhoJ
Names
Rho-related GTP-binding protein RhoJ

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    37720834..37831907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013067772.2 → XP_012923226.1  rho-related GTP-binding protein RhoJ isoform X2

    Conserved Domains (2) summary
    TIGR00231
    Location:24 → 170
    small_GTP; small GTP-binding protein domain
    cl21455
    Location:23 → 166
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_004837426.2 → XP_004837483.1  rho-related GTP-binding protein RhoJ isoform X1

    See identical proteins and their annotated locations for XP_004837483.1

    UniProtKB/TrEMBL
    G5BCY9
    Related
    ENSHGLP00000011280.1, ENSHGLT00000011406.1
    Conserved Domains (2) summary
    smart00174
    Location:25 → 198
    RHO; Rho (Ras homology) subfamily of Ras-like small GTPases
    cl21455
    Location:23 → 196
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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