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Tmcc3 transmembrane and coiled-coil domain family 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101711640, updated on 8-Mar-2024

Summary

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Gene symbol
Tmcc3
Gene description
transmembrane and coiled-coil domain family 3
See related
Ensembl:ENSHGLG00000018825
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Tmcc3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (12186314..12404661)

NW_004624750.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein of 40 kDa-like Neighboring gene uncharacterized LOC110349196 Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 pseudogene Neighboring gene uncharacterized LOC110349197

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and coiled-coil domains protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    12186314..12404661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013072291.2 → XP_012927745.1  transmembrane and coiled-coil domains protein 3 isoform X3

    See identical proteins and their annotated locations for XP_012927745.1

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  2. XM_004844946.2 → XP_004845003.1  transmembrane and coiled-coil domains protein 3 isoform X3

    See identical proteins and their annotated locations for XP_004845003.1

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  3. XM_004844943.2 → XP_004845000.1  transmembrane and coiled-coil domains protein 3 isoform X1

    Related
    ENSHGLP00000026460.1, ENSHGLT00000026696.1
    Conserved Domains (1) summary
    pfam10267
    Location:69 → 463
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  4. XM_004844953.3 → XP_004845010.1  transmembrane and coiled-coil domains protein 3 isoform X4

    Conserved Domains (1) summary
    pfam10267
    Location:69 → 312
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  5. XM_004844952.3 → XP_004845009.1  transmembrane and coiled-coil domains protein 3 isoform X3

    See identical proteins and their annotated locations for XP_004845009.1

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  6. XM_021258462.1 → XP_021114121.1  transmembrane and coiled-coil domains protein 3 isoform X2

    Conserved Domains (1) summary
    pfam10267
    Location:44 → 438
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  7. XM_021258464.1 → XP_021114123.1  transmembrane and coiled-coil domains protein 3 isoform X3

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  8. XM_004844951.2 → XP_004845008.1  transmembrane and coiled-coil domains protein 3 isoform X3

    See identical proteins and their annotated locations for XP_004845008.1

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  9. XM_021258465.1 → XP_021114124.1  transmembrane and coiled-coil domains protein 3 isoform X3

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein

  10. XM_021258463.1 → XP_021114122.1  transmembrane and coiled-coil domains protein 3 isoform X3

    Conserved Domains (1) summary
    pfam10267
    Location:38 → 432
    Tmemb_cc2; Predicted transmembrane and coiled-coil 2 protein
Nucleotide Protein
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