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Sycp3 synaptonemal complex protein 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101711639, updated on 8-Mar-2024

Summary

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Gene symbol
Sycp3
Gene description
synaptonemal complex protein 3
Locus tag
GW7_15040
See related
Ensembl:ENSHGLG00000004845
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Sycp3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (6345112..6358724)

NW_004624750.1Genomic Context describing neighboring genes Neighboring gene DNA damage regulated autophagy modulator 1 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene choline phosphotransferase 1 Neighboring gene cytochrome c-like Neighboring gene uncharacterized LOC110349124

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptonemal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptonemal complex protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    6345112..6358724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844854.3 → XP_004844911.1  synaptonemal complex protein 3

    See identical proteins and their annotated locations for XP_004844911.1

    UniProtKB/TrEMBL
    G5BBJ2
    Related
    ENSHGLP00000006628.1, ENSHGLT00000006710.1
    Conserved Domains (1) summary
    pfam04803
    Location:85 → 204
    Cor1; Cor1/Xlr/Xmr conserved region
Nucleotide Protein
Heading Accession and Version

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