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Hmgxb4 HMG-box containing 4 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101711137, updated on 8-Mar-2024

Summary

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Gene symbol
Hmgxb4
Gene description
HMG-box containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Hmgxb4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (382057..409259, complement)

NW_004624750.1Genomic Context describing neighboring genes Neighboring gene heme oxygenase 1 Neighboring gene target of myb1 membrane trafficking protein Neighboring gene uncharacterized LOC101710901 Neighboring gene uncharacterized LOC101712471 Neighboring gene uncharacterized LOC106009411

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
HMG domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    382057..409259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013072254.2 → XP_012927708.1  HMG domain-containing protein 4 isoform X6

    Conserved Domains (2) summary
    cd00084
    Location:414 → 477
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:109 → 230
    DUF4171; Domain of unknown function (DUF4171)

  2. XM_021258332.1 → XP_021113991.1  HMG domain-containing protein 4 isoform X5

    Conserved Domains (2) summary
    cd00084
    Location:420 → 483
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:115 → 242
    DUF4171; Domain of unknown function (DUF4171)

  3. XM_021258331.1 → XP_021113990.1  HMG domain-containing protein 4 isoform X4

    Conserved Domains (2) summary
    cd00084
    Location:301 → 362
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 125
    DUF4171; Domain of unknown function (DUF4171)

  4. XM_021258330.1 → XP_021113989.1  HMG domain-containing protein 4 isoform X3

    Conserved Domains (2) summary
    cd00084
    Location:301 → 363
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 125
    DUF4171; Domain of unknown function (DUF4171)

  5. XM_021258328.1 → XP_021113987.1  HMG domain-containing protein 4 isoform X1

    Conserved Domains (2) summary
    cd00084
    Location:303 → 366
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 125
    DUF4171; Domain of unknown function (DUF4171)

  6. XM_013072256.2 → XP_012927710.1  HMG domain-containing protein 4 isoform X1

    Conserved Domains (2) summary
    cd00084
    Location:303 → 366
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 125
    DUF4171; Domain of unknown function (DUF4171)

  7. XM_021258329.1 → XP_021113988.1  HMG domain-containing protein 4 isoform X2

    Conserved Domains (2) summary
    cd00084
    Location:303 → 366
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 125
    DUF4171; Domain of unknown function (DUF4171)

  8. XM_004844770.2 → XP_004844827.1  HMG domain-containing protein 4 isoform X6

    Conserved Domains (2) summary
    cd00084
    Location:414 → 477
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:109 → 230
    DUF4171; Domain of unknown function (DUF4171)

  9. XM_013072255.2 → XP_012927709.1  HMG domain-containing protein 4 isoform X1

    Conserved Domains (2) summary
    cd00084
    Location:303 → 366
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 125
    DUF4171; Domain of unknown function (DUF4171)

RNA

  1. XR_002394910.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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