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Bbs10 Bardet-Biedl syndrome 10 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101708171, updated on 8-Mar-2024

Summary

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Gene symbol
Bbs10
Gene description
Bardet-Biedl syndrome 10
See related
Ensembl:ENSHGLG00000012486
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Bbs10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (21759412..21763608)

NW_004624750.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 8 Neighboring gene E3 ubiquitin-protein ligase RNF115 pseudogene Neighboring gene cell division cycle protein 20 homolog pseudogene Neighboring gene POU domain, class 5, transcription factor 1-like Neighboring gene chromodomain Y-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bardet-Biedl syndrome 10 protein
Names
Bardet-Biedl syndrome 10 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    21759412..21763608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004845012.2 → XP_004845069.1  Bardet-Biedl syndrome 10 protein

    UniProtKB/TrEMBL
    A0A0P6JD55, G5C9H4
    Related
    ENSHGLP00000017432.1, ENSHGLT00000017606.1
    Conserved Domains (2) summary
    pfam00118
    Location:17 → 424
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family
    cl02777
    Location:7 → 91
    chaperonin_like; chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I ...
Nucleotide Protein
Heading Accession and Version

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