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Lgals12 galectin 12 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101706777, updated on 8-Mar-2024

Summary

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Gene symbol
Lgals12
Gene description
galectin 12
See related
Ensembl:ENSHGLG00000003580
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Lgals12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624926.1 (1416674..1427162, complement)

NW_004624926.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 8 Neighboring gene uncharacterized LOC110347403 Neighboring gene phospholipase A and acyltransferase 5 Neighboring gene zinc finger protein 791-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624926 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lactose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lymphatic endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624926.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1416674..1427162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021251868.1 → XP_021107527.1  galectin-12 isoform X3

    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin

  2. XM_021251870.1 → XP_021107529.1  galectin-12 isoform X4

    Conserved Domains (1) summary
    smart00908
    Location:1 → 119
    Gal-bind_lectin; Galactoside-binding lectin

  3. XM_021251867.1 → XP_021107526.1  galectin-12 isoform X3

    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin

  4. XM_021251866.1 → XP_021107525.1  galectin-12 isoform X2

    Conserved Domains (1) summary
    smart00908
    Location:85 → 185
    Gal-bind_lectin; Galactoside-binding lectin

  5. XM_021251865.1 → XP_021107524.1  galectin-12 isoform X1

    Conserved Domains (1) summary
    smart00908
    Location:85 → 210
    Gal-bind_lectin; Galactoside-binding lectin

  6. XM_021251869.1 → XP_021107528.1  galectin-12 isoform X4

    Conserved Domains (1) summary
    smart00908
    Location:1 → 119
    Gal-bind_lectin; Galactoside-binding lectin

  7. XM_013069081.2 → XP_012924535.2  galectin-12 isoform X3

    Related
    ENSHGLP00000004876.1, ENSHGLT00000004940.1
    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
Heading Accession and Version

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