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Mybpc1 myosin binding protein C1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101704893, updated on 8-Mar-2024

Summary

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Gene symbol
Mybpc1
Gene description
myosin binding protein C1
See related
Ensembl:ENSHGLG00000007760
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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See Mybpc1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (6380658..6447404, complement)

NW_004624750.1Genomic Context describing neighboring genes Neighboring gene choline phosphotransferase 1 Neighboring gene cytochrome c-like Neighboring gene uncharacterized LOC110349124 Neighboring gene uncharacterized LOC110349125 Neighboring gene Spi-C transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin-binding protein C, slow-type
Names
myosin binding protein C, slow type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    6380658..6447404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021258413.1 → XP_021114072.1  myosin-binding protein C, slow-type isoform X1

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Conserved Domains (6) summary
    cd05894
    Location:558 → 643
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00410
    Location:468 → 545
    IG_like; Immunoglobulin like
    cd00063
    Location:647 → 736
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1056 → 1145
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:865 → 923
    Ig; Immunoglobulin domain
    cl28434
    Location:371 → 455
    I-set; Immunoglobulin I-set domain

  2. XM_021258415.1 → XP_021114074.1  myosin-binding protein C, slow-type isoform X3

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Conserved Domains (6) summary
    cd05894
    Location:533 → 618
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00410
    Location:443 → 520
    IG_like; Immunoglobulin like
    cd00063
    Location:622 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1049 → 1138
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:858 → 916
    Ig; Immunoglobulin domain
    cl28434
    Location:346 → 430
    I-set; Immunoglobulin I-set domain

  3. XM_021258414.1 → XP_021114073.1  myosin-binding protein C, slow-type isoform X2

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Conserved Domains (6) summary
    cd05894
    Location:533 → 618
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00410
    Location:443 → 520
    IG_like; Immunoglobulin like
    cd00063
    Location:622 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1052 → 1141
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:861 → 919
    Ig; Immunoglobulin domain
    cl28434
    Location:346 → 430
    I-set; Immunoglobulin I-set domain

  4. XM_021258418.1 → XP_021114077.1  myosin-binding protein C, slow-type isoform X6

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Conserved Domains (6) summary
    cd05894
    Location:533 → 618
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00410
    Location:443 → 520
    IG_like; Immunoglobulin like
    cd00063
    Location:622 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1031 → 1120
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:840 → 898
    Ig; Immunoglobulin domain
    cl28434
    Location:346 → 430
    I-set; Immunoglobulin I-set domain

  5. XM_021258416.1 → XP_021114075.1  myosin-binding protein C, slow-type isoform X4

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Conserved Domains (7) summary
    cd05894
    Location:558 → 643
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00409
    Location:91 → 186
    IG; Immunoglobulin
    smart00410
    Location:468 → 545
    IG_like; Immunoglobulin like
    cd00063
    Location:647 → 736
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1056 → 1145
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:865 → 923
    Ig; Immunoglobulin domain
    cl28434
    Location:371 → 455
    I-set; Immunoglobulin I-set domain

  6. XM_021258417.1 → XP_021114076.1  myosin-binding protein C, slow-type isoform X5

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Conserved Domains (6) summary
    cd05894
    Location:533 → 618
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00410
    Location:443 → 520
    IG_like; Immunoglobulin like
    cd00063
    Location:622 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1049 → 1138
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:858 → 916
    Ig; Immunoglobulin domain
    cl28434
    Location:346 → 430
    I-set; Immunoglobulin I-set domain

  7. XM_021258419.1 → XP_021114078.1  myosin-binding protein C, slow-type isoform X7

    UniProtKB/TrEMBL
    A0A0P6J7V5
    Related
    ENSHGLP00000010813.1, ENSHGLT00000010935.1
    Conserved Domains (7) summary
    cd05894
    Location:533 → 618
    Ig_C5_MyBP-C; C5 immunoglobulin (Ig) domain of cardiac myosin binding protein C (MyBP-C)
    smart00409
    Location:443 → 520
    IG; Immunoglobulin
    smart00410
    Location:66 → 161
    IG_like; Immunoglobulin like
    cd00063
    Location:622 → 711
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:1031 → 1120
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:840 → 898
    Ig; Immunoglobulin domain
    cl28434
    Location:346 → 430
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
Heading Accession and Version

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