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Bpifc BPI fold containing family C [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101699911, updated on 8-Mar-2024

Summary

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Gene symbol
Bpifc
Gene description
BPI fold containing family C
Locus tag
GW7_07162
See related
Ensembl:ENSHGLG00000004370
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624750.1 (1997493..2043910)

NW_004624750.1Genomic Context describing neighboring genes Neighboring gene synapsin III Neighboring gene uncharacterized LOC106009407 Neighboring gene F-box protein 7 Neighboring gene RNA 2',3'-cyclic phosphate and 5'-OH ligase Neighboring gene PR/SET domain 4 Neighboring gene PWP1 homolog, endonuclein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004624750 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BPI fold-containing family C protein
Names
Bactericidal/permeability-increasing protein-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624750.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1997493..2043910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021258349.1 → XP_021114008.1  BPI fold-containing family C protein isoform X2

    Conserved Domains (2) summary
    pfam01273
    Location:41 → 208
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:245 → 482
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  2. XM_021258348.1 → XP_021114007.1  BPI fold-containing family C protein isoform X2

    Conserved Domains (2) summary
    pfam01273
    Location:41 → 208
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:245 → 482
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  3. XM_021258350.1 → XP_021114009.1  BPI fold-containing family C protein isoform X2

    Conserved Domains (2) summary
    pfam01273
    Location:41 → 208
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:245 → 482
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  4. XM_021258347.1 → XP_021114006.1  BPI fold-containing family C protein isoform X2

    Conserved Domains (2) summary
    pfam01273
    Location:41 → 208
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:245 → 482
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  5. XM_021258354.1 → XP_021114013.1  BPI fold-containing family C protein isoform X4

    Conserved Domains (2) summary
    pfam01273
    Location:29 → 154
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:191 → 428
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  6. XM_021258351.1 → XP_021114010.1  BPI fold-containing family C protein isoform X3

    UniProtKB/TrEMBL
    G5BPE2
    Conserved Domains (2) summary
    pfam01273
    Location:34 → 201
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:238 → 475
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  7. XM_021258353.1 → XP_021114012.1  BPI fold-containing family C protein isoform X4

    Conserved Domains (2) summary
    pfam01273
    Location:29 → 154
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:191 → 428
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  8. XM_021258352.1 → XP_021114011.1  BPI fold-containing family C protein isoform X3

    UniProtKB/TrEMBL
    G5BPE2
    Conserved Domains (2) summary
    pfam01273
    Location:34 → 201
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:238 → 475
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  9. XM_021258355.1 → XP_021114014.1  BPI fold-containing family C protein isoform X4

    Conserved Domains (2) summary
    pfam01273
    Location:29 → 154
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:191 → 428
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  10. XM_004845066.2 → XP_004845123.1  BPI fold-containing family C protein isoform X3

    See identical proteins and their annotated locations for XP_004845123.1

    UniProtKB/TrEMBL
    G5BPE2
    Related
    ENSHGLP00000005978.1, ENSHGLT00000006052.1
    Conserved Domains (2) summary
    pfam01273
    Location:34 → 201
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:238 → 475
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  11. XM_021258356.1 → XP_021114015.1  BPI fold-containing family C protein isoform X4

    Conserved Domains (2) summary
    pfam01273
    Location:29 → 154
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:191 → 428
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  12. XM_021258357.1 → XP_021114016.1  BPI fold-containing family C protein isoform X5

    Conserved Domains (2) summary
    pfam01273
    Location:45 → 212
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:249 → 415
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  13. XM_021258358.1 → XP_021114017.1  BPI fold-containing family C protein isoform X5

    Conserved Domains (2) summary
    pfam01273
    Location:45 → 212
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:249 → 415
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  14. XM_021258346.1 → XP_021114005.1  BPI fold-containing family C protein isoform X1

    Conserved Domains (2) summary
    pfam01273
    Location:45 → 212
    LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    cl00188
    Location:249 → 486
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...
Nucleotide Protein
Heading Accession and Version

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