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LOC101264794 protein NLP7 [ Solanum lycopersicum (tomato) ]

Gene ID: 101264794, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101264794
Gene description
protein NLP7
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101264794 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 12 NC_015449.3 (4033788..4039479)
102 previous assembly SL2.50 (GCF_000188115.3) 12 NC_015449.2 (4033744..4039454)

Chromosome 12 - NC_015449.3Genomic Context describing neighboring genes Neighboring gene phospholipase D alpha 1-like Neighboring gene general transcription factor 3C polypeptide 5 Neighboring gene WRKY transcription factor Neighboring gene uncharacterized LOC109119154

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NLP7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015449.3 Reference SL3.0 Primary Assembly

    Range
    4033788..4039479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004251775.4 → XP_004251823.1  protein NLP7

    UniProtKB/TrEMBL
    A0A3Q7J4Y8
    Conserved Domains (1) summary
    pfam02042
    Location:33 → 80
    RWP-RK; RWP-RK domain
Nucleotide Protein
Heading Accession and Version

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