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LOC101258781 zinc finger protein CONSTANS-LIKE 13 [ Solanum lycopersicum (tomato) ]

Gene ID: 101258781, updated on 1-Nov-2024

Summary

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Gene symbol
LOC101258781
Gene description
zinc finger protein CONSTANS-LIKE 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101258781 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 9 NC_090808.1 (63702853..63705552, complement)
103 previous assembly SL3.0 (GCF_000188115.4) 9 NC_015446.3 (66799680..66802017, complement)

Chromosome 9 - NC_090808.1Genomic Context describing neighboring genes Neighboring gene bidirectional sugar transporter NEC1 Neighboring gene CASP-like protein 1E1 Neighboring gene glutaredoxin-C13 Neighboring gene glutaredoxin-C11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein CONSTANS-LIKE 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLM_r2.1 Primary Assembly

Genomic

  1. NC_090808.1 Reference SLM_r2.1 Primary Assembly

    Range
    63702853..63705552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004247410.4 → XP_004247458.2  zinc finger protein CONSTANS-LIKE 13

Nucleotide Protein
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