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LOC101220512 trihelix transcription factor ASIL2 [ Cucumis sativus (cucumber) ]

Gene ID: 101220512, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101220512
Gene description
trihelix transcription factor ASIL2
Locus tag
Csa_008123
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101220512 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 5 NC_026659.2 (28967664..28969774)
101 previous assembly ASM407v2 (GCF_000004075.2) 5 NC_026659.1 (25094012..25096080)

Chromosome 5 - NC_026659.2Genomic Context describing neighboring genes Neighboring gene NAD(P)H:quinone oxidoreductase Neighboring gene aspartyl protease AED3 Neighboring gene transcription factor IIIA Neighboring gene E3 ubiquitin-protein ligase KEG

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trihelix transcription factor ASIL2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026659.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    28967664..28969774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004142433.3 → XP_004142481.2  trihelix transcription factor ASIL2

    See identical proteins and their annotated locations for XP_004142481.2

    UniProtKB/TrEMBL
    A0A0A0KRQ8
    Conserved Domains (1) summary
    pfam13837
    Location:59 → 140
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
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