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LOC101220234 protein RADIALIS-like 1 [ Cucumis sativus (cucumber) ]

Gene ID: 101220234, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101220234
Gene description
protein RADIALIS-like 1
Locus tag
Csa_020265
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101220234 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 7 NC_026661.2 (79417..80693)
101 previous assembly ASM407v2 (GCF_000004075.2) 7 NC_026661.1 (6435119..6436371)

Chromosome 7 - NC_026661.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116405101 Neighboring gene uncharacterized LOC116405096 Neighboring gene uncharacterized LOC116405010 Neighboring gene protein RADIALIS-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RADIALIS-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026661.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    79417..80693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004151068.3 → XP_004151116.1  protein RADIALIS-like 1

    See identical proteins and their annotated locations for XP_004151116.1

    UniProtKB/TrEMBL
    A0A0A0K344
    Conserved Domains (1) summary
    cd00167
    Location:12 → 58
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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