U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101217750 transcription factor BIM2 [ Cucumis sativus (cucumber) ]

Gene ID: 101217750, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101217750
Gene description
transcription factor BIM2
Locus tag
Csa_018291
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101217750 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 6 NC_026660.2 (18737541..18742671, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 6 NC_026660.1 (16886693..16891729, complement)

Chromosome 6 - NC_026660.2Genomic Context describing neighboring genes Neighboring gene D-aminoacyl-tRNA deacylase Neighboring gene uncharacterized LOC101217989 Neighboring gene uncharacterized LOC116404688 Neighboring gene putative nucleobase-ascorbate transporter 10 Neighboring gene disease resistance protein RGA2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor BIM2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026660.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    18737541..18742671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031887969.1 → XP_031743829.1  transcription factor BIM2

    UniProtKB/TrEMBL
    A0A0A0KD98
    Conserved Domains (1) summary
    cd11453
    Location:48 → 124
    bHLH_AtBIM_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana BES1-interacting Myc-like proteins (BIMs) and similar proteins

  2. XM_011659112.2 → XP_011657414.1  transcription factor BIM2

    See identical proteins and their annotated locations for XP_011657414.1

    UniProtKB/TrEMBL
    A0A0A0KD98
    Conserved Domains (1) summary
    cd11453
    Location:48 → 124
    bHLH_AtBIM_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana BES1-interacting Myc-like proteins (BIMs) and similar proteins

RNA

  1. XR_969809.2 RNA Sequence

  2. XR_969810.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases