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LOC101216876 transcription factor MYC2 [ Cucumis sativus (cucumber) ]

Gene ID: 101216876, updated on 14-Dec-2023

Summary

Gene symbol
LOC101216876
Gene description
transcription factor MYC2
Locus tag
Csa_005554
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

See LOC101216876 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 6 NC_026660.2 (7178027..7179478, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 6 NC_026660.1 (7137125..7138657, complement)

Chromosome 6 - NC_026660.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105435778 Neighboring gene uncharacterized LOC101217115 Neighboring gene probable serine/threonine-protein kinase samkC Neighboring gene uncharacterized LOC101216403

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026660.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    7178027..7179478 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004140569.3XP_004140617.1  transcription factor MYC2

    See identical proteins and their annotated locations for XP_004140617.1

    UniProtKB/TrEMBL
    A0A0A0KFN7
    Conserved Domains (2) summary
    pfam14215
    Location:17165
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal
    cl00081
    Location:244316
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily