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LOC101214626 transcription factor MYB1R1 [ Cucumis sativus (cucumber) ]

Gene ID: 101214626, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101214626
Gene description
transcription factor MYB1R1
Locus tag
Csa_014079
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101214626 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 1 NC_026655.2 (1252568..1254774)
101 previous assembly ASM407v2 (GCF_000004075.2) 1 NC_026655.1 (1226558..1228681)

Chromosome 1 - NC_026655.2Genomic Context describing neighboring genes Neighboring gene TORTIFOLIA1-like protein 3 Neighboring gene uncharacterized LOC105436207 Neighboring gene serine/threonine-protein kinase AtPK2/AtPK19 Neighboring gene transportin MOS14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to auxin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to ethylene IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to gibberellin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor MYB1R1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026655.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    1252568..1254774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004138088.3 → XP_004138136.1  transcription factor MYB1R1

    See identical proteins and their annotated locations for XP_004138136.1

    UniProtKB/TrEMBL
    A0A0A0LUD4
    Conserved Domains (2) summary
    PLN03162
    Location:54 → 227
    PLN03162; golden-2 like transcription factor; Provisional
    cl21498
    Location:99 → 148
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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