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LOC101214025 NAC domain-containing protein 104 [ Cucumis sativus (cucumber) ]

Gene ID: 101214025, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101214025
Gene description
NAC domain-containing protein 104
Locus tag
Csa_016924
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101214025 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (15454099..15456649, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (15043797..15046325, complement)

Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101214268 Neighboring gene U-box domain-containing protein 26 Neighboring gene ABC transporter G family member 5 Neighboring gene uncharacterized LOC101217609

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in system development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 104

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    15454099..15456649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004147300.3 → XP_004147348.1  NAC domain-containing protein 104 isoform X1

    See identical proteins and their annotated locations for XP_004147348.1

    UniProtKB/TrEMBL
    A0A0A0LME0
    Conserved Domains (1) summary
    pfam02365
    Location:23 → 103
    NAM; No apical meristem (NAM) protein

  2. XM_031880667.1 → XP_031736527.1  NAC domain-containing protein 104 isoform X2

    Conserved Domains (1) summary
    pfam02365
    Location:3 → 83
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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