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LOC101210326 ethylene-response factor C3 [ Cucumis sativus (cucumber) ]

Gene ID: 101210326, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101210326
Gene description
ethylene-response factor C3
Locus tag
Csa_011784
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101210326 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (9386236..9387363, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (9196825..9197786, complement)

Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene probable inorganic phosphate transporter 1-3 Neighboring gene serine/threonine-protein phosphatase PP1 isozyme 3 Neighboring gene ethylene-responsive transcription factor ERF098 Neighboring gene ethylene-responsive transcription factor 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-response factor C3
Names
ethylene-responsive transcription factor 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    9386236..9387363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004134020.3 → XP_004134068.1  ethylene-response factor C3

    See identical proteins and their annotated locations for XP_004134068.1

    UniProtKB/TrEMBL
    A0A0A0L750
    Conserved Domains (1) summary
    smart00380
    Location:86 → 149
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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