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LOC101207587 ethylene-responsive transcription factor ABR1 [ Cucumis sativus (cucumber) ]

Gene ID: 101207587, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101207587
Gene description
ethylene-responsive transcription factor ABR1
Locus tag
Csa_003402
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101207587 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 6 NC_026660.2 (24644424..24646101)
101 previous assembly ASM407v2 (GCF_000004075.2) 6 NC_026660.1 (22611659..22613164)

Chromosome 6 - NC_026660.2Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase/endoribonuclease IRE1a Neighboring gene pentatricopeptide repeat-containing protein At4g13650 Neighboring gene uncharacterized LOC105435896 Neighboring gene small nucleolar RNA SNORD14 Neighboring gene small nucleolar RNA snoR99

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ABR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026660.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    24644424..24646101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004141998.3 → XP_004142046.1  ethylene-responsive transcription factor ABR1

    See identical proteins and their annotated locations for XP_004142046.1

    UniProtKB/TrEMBL
    A0A0A0KKX4
    Conserved Domains (1) summary
    smart00380
    Location:133 → 192
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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