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LOC101204958 ethylene-responsive transcription factor RAP2-1 [ Cucumis sativus (cucumber) ]

Gene ID: 101204958, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101204958
Gene description
ethylene-responsive transcription factor RAP2-1
Locus tag
Csa_018768
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101204958 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (18124491..18125719)
101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (16710995..16712003)

Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g06744 Neighboring gene long chain base biosynthesis protein 1 Neighboring gene WUSCHEL-related homeobox 4 Neighboring gene uncharacterized LOC105434641

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor RAP2-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    18124491..18125719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004142827.3 → XP_004142875.1  ethylene-responsive transcription factor RAP2-1

    See identical proteins and their annotated locations for XP_004142875.1

    UniProtKB/TrEMBL
    A0A0A0LR87
    Conserved Domains (1) summary
    smart00380
    Location:23 → 79
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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