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AGTPBP1 ATP/GTP binding carboxypeptidase 1 [ Ovis aries (sheep) ]

Gene ID: 101115757, updated on 6-Jun-2024

Summary

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Gene symbol
AGTPBP1
Gene description
ATP/GTP binding carboxypeptidase 1
See related
EnsemblRapid:ENSOARG00020003359
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See AGTPBP1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 2 NC_056055.1 (33978899..34170838)

Chromosome 2 - NC_056055.1Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 35, NatC auxiliary subunit Neighboring gene programmed cell death protein 10-like Neighboring gene NEDD8-conjugating enzyme UBE2F-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC121818536

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056055.1 Chromosome 2 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A missense mutation in AGTPBP1 was identified in sheep with a lower motor neuron disease. Zhao X, et al. Heredity (Edinb), 2012 Sep. PMID 22588130, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C-terminal protein deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein side chain deglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic carboxypeptidase 1
Names
ATP/GTP binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056055.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    33978899..34170838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015093043.3 → XP_014948529.3  cytosolic carboxypeptidase 1 isoform X1

    UniProtKB/TrEMBL
    A0A836A9U5, W5PGD9
    Related
    ENSOARP00020004392.2, ENSOART00020005334.2
    Conserved Domains (1) summary
    cd06906
    Location:869 → 1139
    M14_Nna1; Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases

  2. XM_060409111.1 → XP_060265094.1  cytosolic carboxypeptidase 1 isoform X2

    UniProtKB/TrEMBL
    W5PGD9
    Related
    ENSOARP00020004357.2, ENSOART00020005295.2

  3. XM_060409112.1 → XP_060265095.1  cytosolic carboxypeptidase 1 isoform X3

    UniProtKB/TrEMBL
    W5PGD9
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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