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HOXB13 homeobox B13 [ Ovis aries (sheep) ]

Gene ID: 101114626, updated on 8-Mar-2024

Summary

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Gene symbol
HOXB13
Gene description
homeobox B13
See related
EnsemblRapid:ENSOARG00020022195
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See HOXB13 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (37525009..37530787)

Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene tubulin tyrosine ligase like 6 Neighboring gene uncharacterized LOC121820603 Neighboring gene uncharacterized LOC121820606 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene uncharacterized LOC121820604 Neighboring gene uncharacterized LOC132657419

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-B13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    37525009..37530787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004012802.4 → XP_004012851.2  homeobox protein Hox-B13

    UniProtKB/TrEMBL
    A0A6P3EA83, W5PA69
    Related
    ENSOARP00020028382.1, ENSOART00020034388.2
    Conserved Domains (2) summary
    pfam00046
    Location:220 → 274
    Homeobox; Homeobox domain
    pfam12284
    Location:12 → 122
    HoxA13_N; Hox protein A13 N terminal
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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