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CCDC65 coiled-coil domain containing 65 [ Ovis aries (sheep) ]

Gene ID: 101104220, updated on 8-Mar-2024

Summary

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Gene symbol
CCDC65
Gene description
coiled-coil domain containing 65
See related
EnsemblRapid:ENSOARG00020001481
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See CCDC65 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (137291357..137300324, complement)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene Wnt family member 10B Neighboring gene FKBP prolyl isomerase 11 Neighboring gene ARF GTPase 3 Neighboring gene Rho family GTPase 1 Neighboring gene DEAD-box helicase 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Nonsense Variant in CCDC65 Gene Causes Respiratory Failure Associated with Increased Lamb Mortality in French Lacaune Dairy Sheep. Ben Braiek M, et al. Genes (Basel), 2021 Dec 24. PMID 35052387, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A Nonsense Variant in CCDC65 Gene Causes Respiratory Failure Associated with Increased Lamb Mortality in French Lacaune Dairy Sheep.
    Title: A Nonsense Variant in CCDC65 Gene Causes Respiratory Failure Associated with Increased Lamb Mortality in French Lacaune Dairy Sheep.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axonemal dynein complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cilium movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of axonemal dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein regulatory complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    137291357..137300324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027967387.3 → XP_027823188.1  dynein regulatory complex subunit 2

    UniProtKB/TrEMBL
    A0A6P3EBL9, A0A6P7DWJ7, W5QCQ9
    Conserved Domains (2) summary
    TIGR02169
    Location:75 → 438
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam14772
    Location:27 → 124
    NYD-SP28; Sperm tail

  2. XM_004006389.6 → XP_004006438.1  dynein regulatory complex subunit 2

    See identical proteins and their annotated locations for XP_004006438.1

    UniProtKB/TrEMBL
    A0A6P3EBL9, A0A6P7DWJ7, W5QCQ9
    Related
    ENSOARP00020001884.1, ENSOART00020002253.2
    Conserved Domains (2) summary
    TIGR02169
    Location:75 → 438
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    pfam14772
    Location:27 → 124
    NYD-SP28; Sperm tail
Nucleotide Protein Strain
Heading Accession and Version

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