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FOXN1 forkhead box N1 [ Felis catus (domestic cat) ]

Gene ID: 101099600, updated on 17-Aug-2024

Summary

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Official Symbol
FOXN1
Official Full Name
forkhead box N1
Primary source
VGNC:VGNC:62340
See related
EnsemblRapid:ENSFCTG00005012327
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See FOXN1 in Genome Data Viewer
Location:
chromosome: E1
Exon count:
10
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (18227070..18255680, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (18251906..18280535, complement)

Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA1 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class S Neighboring gene unc-119 lipid binding chaperone Neighboring gene solute carrier family 13 member 2 Neighboring gene uncharacterized LOC123381953 Neighboring gene uncharacterized LOC111557849

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein N1
Names
forkead box protein N1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    18227070..18255680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019817475.3 → XP_019673034.2  forkhead box protein N1 isoform X3

    UniProtKB/TrEMBL
    M3W997
    Conserved Domains (1) summary
    smart00339
    Location:270 → 354
    FH; FORKHEAD

  2. XM_019817476.3 → XP_019673035.2  forkhead box protein N1 isoform X3

    UniProtKB/TrEMBL
    M3W997
    Conserved Domains (1) summary
    smart00339
    Location:270 → 354
    FH; FORKHEAD

  3. XM_019817473.3 → XP_019673032.2  forkhead box protein N1 isoform X3

    UniProtKB/TrEMBL
    M3W997
    Related
    ENSFCTP00005023958.1, ENSFCTT00005035022.1
    Conserved Domains (1) summary
    smart00339
    Location:270 → 354
    FH; FORKHEAD

  4. XM_019817474.3 → XP_019673033.2  forkhead box protein N1 isoform X3

    UniProtKB/TrEMBL
    M3W997
    Related
    ENSFCTP00005023905.1, ENSFCTT00005034963.1
    Conserved Domains (1) summary
    smart00339
    Location:270 → 354
    FH; FORKHEAD

  5. XM_019817472.3 → XP_019673031.2  forkhead box protein N1 isoform X1

    UniProtKB/TrEMBL
    M3W997
    Conserved Domains (1) summary
    smart00339
    Location:288 → 372
    FH; FORKHEAD

  6. XM_019817477.3 → XP_019673036.2  forkhead box protein N1 isoform X4

    UniProtKB/TrEMBL
    M3W997
    Conserved Domains (1) summary
    smart00339
    Location:204 → 288
    FH; FORKHEAD

  7. XM_003996492.6 → XP_003996541.3  forkhead box protein N1 isoform X2

    UniProtKB/TrEMBL
    M3W997
    Conserved Domains (1) summary
    smart00339
    Location:287 → 371
    FH; FORKHEAD
Nucleotide Protein
Heading Accession and Version

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