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SMPD1 sphingomyelin phosphodiesterase 1 [ Felis catus (domestic cat) ]

Gene ID: 101099497, updated on 8-Mar-2024

Summary

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Official Symbol
SMPD1
Official Full Name
sphingomyelin phosphodiesterase 1
Primary source
VGNC:VGNC:65501
See related
EnsemblRapid:ENSFCTG00005018692
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See SMPD1 in Genome Data Viewer
Location:
chromosome: D1
Exon count:
6
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D1 NC_058377.1 (63260124..63264778)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D1 NC_018732.3 (65188287..65192945)

Chromosome D1 - NC_058377.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 12-like Neighboring gene caveolae associated protein 3 Neighboring gene amyloid beta precursor protein binding family B member 1 Neighboring gene uncharacterized LOC109491982 Neighboring gene hemopexin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acid sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058377.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    63260124..63264778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045038859.1 → XP_044894794.1  sphingomyelin phosphodiesterase isoform X2

    Conserved Domains (2) summary
    smart00741
    Location:77 → 150
    SapB; Saposin (B) Domains
    cd00842
    Location:191 → 483
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain

  2. XM_006937046.4 → XP_006937108.1  sphingomyelin phosphodiesterase isoform X1

    UniProtKB/TrEMBL
    M3X374
    Related
    ENSFCTP00005039561.1, ENSFCTT00005053789.1
    Conserved Domains (2) summary
    smart00741
    Location:77 → 150
    SapB; Saposin (B) Domains
    cd00842
    Location:191 → 486
    MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version

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