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HES7 hes family bHLH transcription factor 7 [ Felis catus (domestic cat) ]

Gene ID: 101080335, updated on 17-Aug-2024

Summary

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Official Symbol
HES7
Official Full Name
hes family bHLH transcription factor 7
Primary source
VGNC:VGNC:62802
See related
EnsemblRapid:ENSFCTG00005031532
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See HES7 in Genome Data Viewer
Location:
chromosome: E1
Exon count:
6
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) E1 NC_058381.1 (2902287..2907655, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) E1 NC_018736.3 (2916155..2921200, complement)

Chromosome E1 - NC_058381.1Genomic Context describing neighboring genes Neighboring gene transfer RNA leucine (anticodon UAG) Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA threonine (anticodon AGU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing Identifies a Missense Mutation in HES7 Associated with Short Tails in Asian Domestic Cats. Xu X, et al. Sci Rep, 2016 Aug 25. PMID 27560986, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HES-7
Names
hairy and enhancer of split 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058381.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    2902287..2907655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019817116.3 → XP_019672675.1  transcription factor HES-7 isoform X2

    UniProtKB/TrEMBL
    A0A5F5Y0S1
    Conserved Domains (2) summary
    NF033201
    Location:116 → 173
    Vip_LPXTG_Lm; cell invasion LPXTG protein Vip
    cl00081
    Location:1 → 59
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

  2. XM_045044952.1 → XP_044900887.1  transcription factor HES-7 isoform X2

    UniProtKB/TrEMBL
    A0A5F5Y0S1
    Conserved Domains (2) summary
    NF033201
    Location:116 → 173
    Vip_LPXTG_Lm; cell invasion LPXTG protein Vip
    cl00081
    Location:1 → 59
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily

  3. XM_003996191.5 → XP_003996240.1  transcription factor HES-7 isoform X1

    UniProtKB/TrEMBL
    M3WM48
    Related
    ENSFCTP00005059218.1, ENSFCTT00005087586.1
    Conserved Domains (1) summary
    cd00083
    Location:14 → 73
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

  4. XM_045044950.1 → XP_044900885.1  transcription factor HES-7 isoform X2

    UniProtKB/TrEMBL
    A0A5F5Y0S1
    Conserved Domains (2) summary
    NF033201
    Location:116 → 173
    Vip_LPXTG_Lm; cell invasion LPXTG protein Vip
    cl00081
    Location:1 → 59
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
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