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FOXB1 forkhead box B1 [ Gallus gallus (chicken) ]

Gene ID: 100859030, updated on 17-Aug-2024

Summary

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Symbol
FOXB1provided by CGNC
Full Name
forkhead box B1provided by CGNC
Primary source
CGNC:64091
See related
Ensembl:ENSGALG00010024704
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See FOXB1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (5268409..5270071, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (5142565..5144234, complement)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene RAR related orphan receptor A Neighboring gene uncharacterized LOC107052149 Neighboring gene uncharacterized LOC124417124 Neighboring gene uncharacterized LOC121111665 Neighboring gene interactor of little elongation complex ELL subunit 2 Neighboring gene annexin A2 Neighboring gene uncharacterized LOC121113486 Neighboring gene uncharacterized LOC107052147

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5268409..5270071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004943754.5 → XP_004943811.1  forkhead box protein B1

    UniProtKB/TrEMBL
    A0A8V0ZZC0
    Related
    ENSGALP00010037068.1, ENSGALT00010060309.1
    Conserved Domains (1) summary
    cd20043
    Location:1 → 110
    FH_FOXB2; Forkhead (FH) domain found in Forkhead box protein B2 (FOXB2) and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5142565..5144234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680751.2 → XP_040536685.1  forkhead box protein B1

    UniProtKB/TrEMBL
    A0A8V0ZZC0
    Conserved Domains (1) summary
    cd20043
    Location:1 → 110
    FH_FOXB2; Forkhead (FH) domain found in Forkhead box protein B2 (FOXB2) and similar proteins
Nucleotide Protein
Heading Accession and Version

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