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LOC100854662 protein BZR1 homolog 3 [ Vitis vinifera (wine grape) ]

Gene ID: 100854662, updated on 23-Oct-2023

Summary

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Gene symbol
LOC100854662
Gene description
protein BZR1 homolog 3
Locus tag
VIT_00021627001
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC100854662 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 10 NC_081814.1 (13379904..13380995, complement)
102 previous assembly 12X (GCF_000003745.3) 10 NC_012016.3 (8385067..8386230)

Chromosome 10 - NC_081814.1Genomic Context describing neighboring genes Neighboring gene berberine bridge enzyme-like 8 Neighboring gene DNA-damage-repair/toleration protein DRT111, chloroplastic Neighboring gene uncharacterized LOC132254556 Neighboring gene kxDL motif-containing protein LO9-177

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brassinosteroid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein BZR1 homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081814.1 Reference ASM3070453v1 Primary Assembly

    Range
    13379904..13380995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003632950.4 → XP_003632998.2  protein BZR1 homolog 3

    UniProtKB/TrEMBL
    F6HLX3
    Conserved Domains (1) summary
    pfam05687
    Location:28 → 136
    BES1_N; BES1/BZR1 plant transcription factor, N-terminal
Nucleotide Protein
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