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LOC100846874 nuclear transcription factor Y subunit A-4 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100846874, updated on 9-Nov-2023

Summary

Gene symbol
LOC100846874
Gene description
nuclear transcription factor Y subunit A-4
Locus tag
BRADI_1g11800v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

See LOC100846874 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (8779332..8783613, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (8779324..8783577, complement)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene putative ABC1 protein At2g40090 Neighboring gene probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 Neighboring gene uncharacterized LOC112270169 Neighboring gene uncharacterized LOC100825061

Genomic regions, transcripts, and products

General protein information

Preferred Names
nuclear transcription factor Y subunit A-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    8779332..8783613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010232978.3XP_010231280.1  nuclear transcription factor Y subunit A-4

    See identical proteins and their annotated locations for XP_010231280.1

    UniProtKB/TrEMBL
    I1GPC2, I1GPC4
    Conserved Domains (1) summary
    smart00521
    Location:168227
    CBF; CCAAT-Binding transcription Factor
  2. XM_014897490.2XP_014752976.1  nuclear transcription factor Y subunit A-4

    UniProtKB/TrEMBL
    I1GPC2, I1GPC4
    Conserved Domains (1) summary
    smart00521
    Location:168227
    CBF; CCAAT-Binding transcription Factor
  3. XM_014897489.2XP_014752975.1  nuclear transcription factor Y subunit A-4

    UniProtKB/TrEMBL
    I1GPC2, I1GPC4
    Conserved Domains (1) summary
    smart00521
    Location:168227
    CBF; CCAAT-Binding transcription Factor
  4. XM_003560935.4XP_003560983.1  nuclear transcription factor Y subunit A-4

    See identical proteins and their annotated locations for XP_003560983.1

    UniProtKB/TrEMBL
    I1GPC2, I1GPC4
    Conserved Domains (1) summary
    smart00521
    Location:168227
    CBF; CCAAT-Binding transcription Factor