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LOC100843085 zinc finger CCCH domain-containing protein 67 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100843085, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100843085
Gene description
zinc finger CCCH domain-containing protein 67
Locus tag
BRADI_4g06290v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100843085 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 4 NC_016134.3 (5248866..5251378, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 4 NC_016134.2 (5247112..5249607, complement)

Chromosome 4 - NC_016134.3Genomic Context describing neighboring genes Neighboring gene F-box/LRR-repeat protein 14-like Neighboring gene guanylate kinase 1 Neighboring gene dicarboxylate transporter 1, chloroplastic Neighboring gene phenylalanine--tRNA ligase beta subunit, cytoplasmic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 67

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016134.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    5248866..5251378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024455188.1 → XP_024310956.1  zinc finger CCCH domain-containing protein 67

    UniProtKB/TrEMBL
    I1II16
    Conserved Domains (3) summary
    smart00356
    Location:218 → 243
    ZnF_C3H1; zinc finger
    cd00204
    Location:58 → 132
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:59 → 90
    ANK; ANK repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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