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LOC100836973 squamosa promoter-binding-like protein 14 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100836973, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100836973
Gene description
squamosa promoter-binding-like protein 14
Locus tag
BRADI_3g40030v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100836973 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 3 NC_016133.3 (42009939..42013818, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 3 NC_016133.2 (42316210..42320055, complement)

Chromosome 3 - NC_016133.3Genomic Context describing neighboring genes Neighboring gene beta-glucosidase 28 Neighboring gene G patch domain-containing protein 11 Neighboring gene uncharacterized LOC104583731 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC112271488

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016133.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    42009939..42013818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010236994.3 → XP_010235296.1  squamosa promoter-binding-like protein 14 isoform X2

    UniProtKB/TrEMBL
    A0A2K2D276
    Conserved Domains (1) summary
    pfam03110
    Location:81 → 155
    SBP; SBP domain

  2. XM_014901563.2 → XP_014757049.1  squamosa promoter-binding-like protein 14 isoform X1

    UniProtKB/TrEMBL
    I1I8G8
    Conserved Domains (1) summary
    pfam03110
    Location:81 → 155
    SBP; SBP domain
Nucleotide Protein Strain
Heading Accession and Version

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