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LOC100836455 zinc finger CCCH domain-containing protein 33 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100836455, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100836455
Gene description
zinc finger CCCH domain-containing protein 33
Locus tag
BRADI_2g38247v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100836455 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (38355302..38357590)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (38610396..38612667)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene trihelix transcription factor GT-3b Neighboring gene uncharacterized LOC100836149 Neighboring gene uncharacterized LOC104583252 Neighboring gene uncharacterized LOC112270947

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    38355302..38357590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003569006.4 → XP_003569054.1  zinc finger CCCH domain-containing protein 33

    UniProtKB/TrEMBL
    A0A0Q3MU12, I1HMN1
    Conserved Domains (1) summary
    pfam00642
    Location:251 → 274
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases