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LOC100835424 BEL1-like homeodomain protein 7 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100835424, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100835424
Gene description
BEL1-like homeodomain protein 7
Locus tag
BRADI_3g26690v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100835424 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 3 NC_016133.3 (27169468..27172013)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 3 NC_016133.2 (27472181..27474451)

Chromosome 3 - NC_016133.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100822769 Neighboring gene ribosomal RNA small subunit methyltransferase I Neighboring gene flowering locus K homology domain Neighboring gene microRNA MIR166i

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEL1-like homeodomain protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016133.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    27169468..27172013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003571731.4 → XP_003571779.1  BEL1-like homeodomain protein 7

    UniProtKB/TrEMBL
    I1I3Z2
    Conserved Domains (2) summary
    pfam05920
    Location:311 → 350
    Homeobox_KN; Homeobox KN domain
    pfam07526
    Location:110 → 245
    POX; Associated with HOX
Nucleotide Protein Strain
Heading Accession and Version

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