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LOC100835143 NAC transcription factor NAM-B1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100835143, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100835143
Gene description
NAC transcription factor NAM-B1
Locus tag
BRADI_1g63600v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100835143 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 1 NC_016131.3 (62975275..62977576)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 1 NC_016131.2 (63030298..63032581)

Chromosome 1 - NC_016131.3Genomic Context describing neighboring genes Neighboring gene probable apyrase 1 Neighboring gene O-fucosyltransferase 18-like Neighboring gene uncharacterized LOC104581787 Neighboring gene ricin B-like lectin R40C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC transcription factor NAM-B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016131.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    62975275..62977576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003557950.4 → XP_003557998.1  NAC transcription factor NAM-B1

    UniProtKB/TrEMBL
    I1H5X2
    Conserved Domains (1) summary
    pfam02365
    Location:12 → 52
    NAM; No apical meristem (NAM) protein
Nucleotide Protein Strain
Heading Accession and Version

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