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LOC100823451 basic leucine zipper 2 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100823451, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100823451
Gene description
basic leucine zipper 2
Locus tag
BRADI_2g06790v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100823451 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (5209641..5211687, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (5209121..5211113, complement)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene cytochrome P450 710A1 Neighboring gene uncharacterized LOC104583043 Neighboring gene probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 Neighboring gene translocase of chloroplast 132, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    5209641..5211687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014898327.2 → XP_014753813.1  basic leucine zipper 2

    UniProtKB/TrEMBL
    A0A0Q3QP89
    Conserved Domains (2) summary
    cl01853
    Location:210 → 282
    YabA; Regulator of replication initiation timing [Replication, recombination and repair]
    cd14703
    Location:188 → 238
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases