U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100822019 uncharacterized LOC100822019 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100822019, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100822019
Gene description
uncharacterized LOC100822019
Locus tag
BRADI_2g47810v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100822019 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (47954242..47957171, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (48208894..48211467, complement)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene IAA-amino acid hydrolase ILR1-like 2 Neighboring gene vesicle transport v-SNARE 13 Neighboring gene glycylpeptide N-tetradecanoyltransferase 1 Neighboring gene probable magnesium transporter NIPA9 Neighboring gene uncharacterized LOC112270894

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC100822019

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    47954242..47957171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024459464.1 → XP_024315232.1  uncharacterized protein LOC100822019

    UniProtKB/TrEMBL
    I1HQU0
    Conserved Domains (1) summary
    smart00353
    Location:290 → 338
    HLH; helix loop helix domain

  2. XM_003566994.4 → XP_003567042.1  uncharacterized protein LOC100822019

    UniProtKB/TrEMBL
    I1HQU0
    Conserved Domains (1) summary
    smart00353
    Location:290 → 338
    HLH; helix loop helix domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases