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LOC100817125 two-component response regulator ORR21 [ Glycine max (soybean) ]

Gene ID: 100817125, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100817125
Gene description
two-component response regulator ORR21
Locus tag
GLYMA_02G085900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC100817125 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 2 NC_016089.4 (7437180..7442053)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 2 NC_016089.3 (7481126..7486112)

Chromosome 2 - NC_016089.4Genomic Context describing neighboring genes Neighboring gene dynamin-related protein 1C Neighboring gene uncharacterized LOC100810515 Neighboring gene phosphatidylinositol transfer protein CSR1 Neighboring gene RNA-dependent RNA polymerase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokinin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphorelay signal transduction system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
two-component response regulator ORR21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_016089.4 Reference Glycine_max_v4.0 Primary Assembly

    Range
    7437180..7442053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003519954.5 → XP_003520002.1  two-component response regulator ORR21 isoform X1

    See identical proteins and their annotated locations for XP_003520002.1

    UniProtKB/TrEMBL
    K7K757
    Conserved Domains (3) summary
    TIGR01557
    Location:198 → 251
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:135 → 258
    PLN03162; golden-2 like transcription factor; Provisional
    cd17584
    Location:16 → 130
    REC_typeB_ARR-like; phosphoacceptor receiver (REC) domain of type B Arabidopsis response regulators (ARRs) and similar domains

  2. XM_041011613.1 → XP_040867547.1  two-component response regulator ORR21 isoform X2

    UniProtKB/TrEMBL
    K7K758
    Conserved Domains (3) summary
    TIGR01557
    Location:171 → 224
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
    PLN03162
    Location:108 → 231
    PLN03162; golden-2 like transcription factor; Provisional
    cd17584
    Location:5 → 103
    REC_typeB_ARR-like; phosphoacceptor receiver (REC) domain of type B Arabidopsis response regulators (ARRs) and similar domains
Nucleotide Protein
Heading Accession and Version

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